| The Breaker Lab

The Breaker Lab

Z. Yao, Barrick, J., Weinberg, Z., Neph, S., Breaker, R., Tompa, M., and Ruzzo, W. L., “A computational pipeline for high- throughput discovery of cis-regulatory noncoding RNA in prokaryotes.”, PLoS Comput Biol, vol. 3, no. 7, p. e126, 2007.

Z. Weinberg, Barrick, J. E., Yao, Z., Roth, A., Kim, J. N., Gore, J., Wang, J. Xin, Lee, E. R., Block, K. F., Sudarsan, N., Neph, S., Tompa, M., Ruzzo, W. L., and Breaker, R. R., “Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline.”, Nucleic Acids Res, vol. 35, no. 14, pp. 4809-19, 2007.

J. E. Barrick, Sudarsan, N., Weinberg, Z., Ruzzo, W. L., and Breaker, R. R., “6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter.”, RNA, vol. 11, no. 5, pp. 774-84, 2005.

M. Mandal, Lee, M., Barrick, J. E., Weinberg, Z., Emilsson, G. Mitchell, Ruzzo, W. L., and Breaker, R. R., “A glycine-dependent riboswitch that uses cooperative binding to control gene expression.”, Science, vol. 306, no. 5694, pp. 275-9, 2004.

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