2023
“Evidence that OLE RNA is a component of a major stress-responsive ribonucleoprotein particle in extremophilic bacteria”, Mol. Microbiol., 2023. ,
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“In vitro Selection and in vivo Testing of Riboswitch-inspired Aptamers”, Bio-protocol, vol. 13, 2023. ,
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“Riboswitches”, Curr Biol., vol. 33, pp. R343-R348, 2023. ,
[Link]
“A conserved uORF in the ilvBNC mRNA of Corynebacterium species regulates ilv operon expression”, Microb. Genom., vol. 9, 2023. ,
[Link]
“Screening for small molecule inhibitors of SAH nucleosidase using an SAH riboswitch”, Anal. Biochem, 2023. ,
[Link]
“Exploiting natural riboswitches for aptamer engineering and validation”, Nucleic Acids Res., vol. 51, no. 2, pp. 966–981, 2023. ,
[Link]
2022
“Ornate, large, extremophilic (OLE) RNA forms a kink turn necessary for OapC protein recognition and RNA function”, J. Biol. Chem., vol. 298, no. 12, 2022. ,
[Link]
“Lithium-sensing riboswitch classes regulate expression of bacterial cation transporter genes”, Sci. Rep., vol. 12, no. 1, 2022. ,
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“Architectures and complex functions of tandem riboswitches”, RNA Biol., vol. 19, pp. 1059-1076, 2022. ,
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“Discovering riboswitches: the past and the future”, Trends Biochem Sci, 2022. ,
[Link]
“Na+ riboswitches regulate genes for diverse physiological processes in bacteria”, Nat. Chem. Biol., vol. 18, 2022. ,
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“Variants of the guanine riboswitch class exhibit altered ligand specificities for xanthine, guanine, or 2′-deoxyguanosine”, PNAS, 2022. ,
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“The Biochemical Landscape of Riboswitch Ligands”, Biochemistry, vol. 61, 2022. ,
[Link]
2021
“Natural circularly permuted group II introns in bacteria produce RNA circles”, iScience, vol. 24, no. 12, 2021. ,
[Link]
“Witnessing the structural evolution of an RNA enzyme”, Elife, vol. 10, p. e71557, 2021. ,
[Link]
“Ribozyme Discovery in Bacteria”, Ribozymes, vol. 1, pp. 281-302, 2021. ,
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“DIMPL: a bioinformatics pipeline for the discovery of structured noncoding RNA motifs in bacteria”, Bioinformatics, 2021. ,
[Link]
“Comprehensive discovery of novel structured noncoding RNAs in 26 bacterial genomes”, RNA Biol, 2021. ,
[Link]
“Structure of a bacterial OapB protein with its OLE RNA target gives insights into the architecture of the OLE ribonucleoprotein complex”, Proc Natl Acad Sci U S A, vol. 118(9), 2021. ,
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“The case of the missing allosteric ribozymes”, Nat Chem Biol, 2021. ,
[Link]