2014

P. J. McCown, Liang, J. J., Weinberg, Z., and Breaker, R. R., “Structural, Functional, and Taxonomic Diversity of Three PreQ1 Riboswitch Classes.”, Chem Biol, vol. 21, no. 7, pp. 880-9, 2014. [PubMed]
J. W. Nelson, Zhou, Z., and Breaker, R. R., “Gramicidin D enhances the antibacterial activity of fluoride.”, Bioorg Med Chem Lett, vol. 24, no. 13, pp. 2969-71, 2014. [PubMed]
A. Roth, Weinberg, Z., G Y Chen, A., Kim, P. B., Ames, T. D., and Breaker, R. R., “A widespread self-cleaving ribozyme class is revealed by bioinformatics.”, Nat Chem Biol, vol. 10, no. 1, pp. 56-60, 2014. [PubMed]
K. Furukawa, Gu, H., and Breaker, R. R., “In Vitro Selection of Allosteric Ribozymes that Sense the Bacterial Second Messenger c-di-GMP.”, Methods Mol Biol, vol. 1111, pp. 209-20, 2014. [PubMed]

2013

S. Li, Smith, K. D., Davis, J. H., Gordon, P. B., Breaker, R. R., and Strobel, S. A., “Eukaryotic resistance to fluoride toxicity mediated by a widespread family of fluoride export proteins.”, Proc Natl Acad Sci U S A, vol. 110, no. 47, pp. 19018-23, 2013. [PubMed]
S. Li and Breaker, R. R., “Eukaryotic TPP riboswitch regulation of alternative splicing involving long-distance base pairing.”, Nucleic Acids Res, vol. 41, no. 5, pp. 3022-31, 2013. [PubMed]
H. Gu, Furukawa, K., Weinberg, Z., Berenson, D. F., and Breaker, R. R., “Small, highly active DNAs that hydrolyze DNA.”, J Am Chem Soc, vol. 135, no. 24, pp. 9121-9, 2013. [PubMed]
H. Gu and Breaker, R. R., “Production of single-stranded DNAs by self-cleavage of rolling-circle amplification products.”, Biotechniques, vol. 54, no. 6, pp. 337-43, 2013. [PubMed]
J. W. Nelson, Sudarsan, N., Furukawa, K., Weinberg, Z., Wang, J. X., and Breaker, R. R., “Riboswitches in eubacteria sense the second messenger c-di-AMP.”, Nat Chem Biol, vol. 9, no. 12, pp. 834-9, 2013. [PubMed]

2012

D. Biscaro Pedrolli, Matern, A., Wang, J., Ester, M., Siedler, K., Breaker, R., and Mack, M., “A highly specialized flavin mononucleotide riboswitch responds differently to similar ligands and confers roseoflavin resistance to Streptomyces davawensis.”, Nucleic Acids Res, vol. 40, no. 17, pp. 8662-73, 2012. [PubMed]
S. Li and Breaker, R. R., “Fluoride enhances the activity of fungicides that destabilize cell membranes.”, Bioorg Med Chem Lett, vol. 22, no. 9, pp. 3317-22, 2012. [PubMed]
H. Gu, Furukawa, K., and Breaker, R. R., “Engineered allosteric ribozymes that sense the bacterial second messenger cyclic diguanosyl 5'-monophosphate.”, Anal Chem, vol. 84, no. 11, pp. 4935-41, 2012. [PubMed]
J. L. Baker, Sudarsan, N., Weinberg, Z., Roth, A., Stockbridge, R. B., and Breaker, R. R., “Widespread genetic switches and toxicity resistance proteins for fluoride.”, Science, vol. 335, no. 6065, pp. 233-5, 2012. [PubMed]
R. R. Breaker, “Riboswitches and the RNA world.”, Cold Spring Harb Perspect Biol, vol. 4, no. 2, 2012. [PubMed]
R. R. Breaker, “Ancient, giant riboswitches at atomic resolution.”, Nat Struct Mol Biol, vol. 19, no. 12, pp. 1208-9, 2012. [PubMed]
K. Furukawa, Gu, H., Sudarsan, N., Hayakawa, Y., Hyodo, M., and Breaker, R. R., “Identification of ligand analogues that control c-di-GMP riboswitches.”, ACS Chem Biol, vol. 7, no. 8, pp. 1436-43, 2012. [PubMed]
J. G. Wallace, Zhou, Z., and Breaker, R. R., “OLE RNA protects extremophilic bacteria from alcohol toxicity.”, Nucleic Acids Res, vol. 40, no. 14, pp. 6898-907, 2012. [PubMed]
R. R. Breaker, Conklin, D. S., Gold, L., Söll, D., Montimurro, J. S., and Agris, P. F., “RNA science and its applications-a look toward the future: Albany, NY USA, November 3-4, 2011.”, RNA Biol, vol. 9, no. 8, pp. 1050-3, 2012. [PubMed]
P. J. McCown, Winkler, W. C., and Breaker, R. R., “Mechanism and distribution of glmS ribozymes.”, Methods Mol Biol, vol. 848, pp. 113-29, 2012. [PubMed]
R. R. Breaker, “New insight on the response of bacteria to fluoride.”, Caries Res, vol. 46, no. 1, pp. 78-81, 2012. [PubMed]

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